Structures of proteins and their complexes modeled by BIOmodeling group available for downloading.

Publications Models Figures
S. Yuan, U. Ghoshdastider, B. Trzaskowski, D. Latek, A. Debinski, W. Pulawski, R. Wu, V. Gerke, S. Filipek, The role of water in activation mechanism of human N formyl Peptide Receptor 1 (FPR1) based on molecular dynamics simulations, PLOS ONE (2012) 7, e47114. doi: 10.1371/journal.pone.0047114. Formyl Peptide Receptor 1 (FPR1) with agonist fMLF with antagonist tBocMLF. The models contain water molecules within a distance < 3 Å from the complex. Agonist fMLF located deep in binding site of FPR1.
T.M. Stepniewski, S. Filipek, Non-peptide ligand binding to the formyl peptide receptor FPR2 - a comparison to peptide ligand binding modes, Bioorg. Med. Chem. (2015) 23, 4072-4081. doi: 10.1016/j.bmc.2015.03.062. Model of free FPR2 and a complex of FPR2 with agonist fMLFK. Zones in the orthosteric binding site of FPR2.

  • April 2023.
    Homology Modeling book edited by S.Filipek

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